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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840058.1_cds_XP_016507493.1_20610
CDS Infomation

[gene=LOC107825180] [db_xref=GeneID:107825180] [protein=homogentisate solanesyltransferase, chloroplastic-like] [protein_id=XP_016507493.1] [location=complement(join(79650..79724,79970..80002,80933..80995,81121..81238,81738..81830,82688..82761,84184..84409,84579..84725,84807..84928,85667..85900))] [gbkey=CDS]
Sequence

ATGGAGCTGGCTTGTTCATCTTGCTCTTCCCTTCGATTTTCATCTGTTTTAACTCACCAA
GATACTGCTGCTTCCCGCTACAGAAAGTTACCACCCACTTCACCTTCTTGTAAAGCTGCT
AATTTTGTGCTCAAATCTTCCAAGAACTTGTCATCTTCAGCTGGATTGCACATTGGCTAC
ACAAACTTTTCAAAGACTGTTTCATATAGAAAATACAGGCACATTTCCATCCGGGCATGC
TCTCAAGTTGGTACTGCTGGATCTGAACCAGTATTGGATAAGCTTTCACAATTTAAAGAT
GCCTTTTGGAGATTTTTGAGGCCCCACACTATACGTGGAACAGCATTAGGATCCCTCTCG
TTGGTTACAAGAGCGTTGATTGAGAATCCAAATCTAATCAGGTGGTCATTGGCAATGAAG
GCTTTTTCTGGTCTGATTGCTCTAATATGTGGAAATGGTTATATAGTGGGCATCAATCAA
ATATATGACATTGGCATTGACAAGGTAAACAAGCCATACTTACCCATAGCAGCGGGAGAT
CTTTCAGTTCAGTCTGCATGGTTCTTGGTGCTATTGTTCGCTATGGCTGGCCTTCTTATT
GTTGGGATTAATTTTGGCCCCTTCATTACTTCTCTTTACTGTCTCGGTCTCTTTCTAGGT
ACCATTTATTCAGTCCCCCCATTTCGCATGAAGAGATTTGCTGTCGTAGCGTTCTTAATA
ATTGCCACGGTACGCGGTTTTCTTCTTAATTATGGTGTGTATTATGCCACAACAGCTGCT
CTGGGGCTAAGCTTTCAGTGGAGCTCACCTGTTGCATTTATTACCACTTTCGTGACTTTG
TTTGCACTGGTCATTGCCATCACCAAGGACCTACCAGATGTGGAGGGTGACCGCAAGTTT
CAGATATCTACCTTGGCAACGAAGCTTGGTGTGAGAAACATAGCGTTCCTTGGCTCTGGG
CTTTTGTTGGCAAACTACATTGGTGCTGTAGTTGCTGCAATTTACATGCCCCAAGCATTC
AGGAGCAGCTTAATGATACCTGTACATGCCATCTTGGCATTGTGTTTAGTCTTCCAGGCA
TGGTTGTTGGAAAAAGCGAATTACACTAAGGAAGCAATCTCAGCATACTATCAATTCATA
TGGAATCTCTTCTATGCTGAGTACCTTATCTTCCCTTTCATCTAA

Peptide Sequence

PEP ID

XP_016507493.1
PEP Infomation

PREDICTED: homogentisate solanesyltransferase, chloroplastic-like [Nicotiana tabacum]
Sequence

MELACSSCSSLRFSSVLTHQDTAASRYRKLPPTSPSCKAANFVLKSSKNLSSSAGLHIGY
TNFSKTVSYRKYRHISIRACSQVGTAGSEPVLDKLSQFKDAFWRFLRPHTIRGTALGSLS
LVTRALIENPNLIRWSLAMKAFSGLIALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGD
LSVQSAWFLVLLFAMAGLLIVGINFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVVAFLI
IATVRGFLLNYGVYYATTAALGLSFQWSSPVAFITTFVTLFALVIAITKDLPDVEGDRKF
QISTLATKLGVRNIAFLGSGLLLANYIGAVVAAIYMPQAFRSSLMIPVHAILALCLVFQA
WLLEKANYTKEAISAYYQFIWNLFYAEYLIFPFI

Transcript Sequence

Gene sequence data has not been registered.